MDCC
People PI

The CBBio People

This is the people that have participated in the computational Biology and Bioinformatics lab all times

We are a team of Biologists, Bioinformaticians, and engineers using computational methods, trying to understand 1) how proteins evolve and acquire novel functions, 2) how mutations impact a given protein function, and 3) how is the relationship between molecular evolution and phenotypic evolution.

CBBio history:

CBBio was founded on 2009 in Barcelona, and moved to Seville in 2013.

Our research has resulted in more than 50 peer-reviewed articles, book chapters, invited reviews, and over 50 oral presentations in national and international venues.

Our Collaborators:

  • Dr. Eva Estébanez-Perpiña (IBUB, Barcelona)
  • Dr. Travis H Stracker (National Cancer Institute, NIH, Bethesda, USA)
  • Pr. Jesús Blázquez-Gómez (CNB-CSIC, Madrid)
  • Dr. Sergio Alonso (IGTP, Barcelona)
  • Dr. Fernando Casares (CABD, Sevilla)
  • Dr. Damien Devos (CABD, Sevilla)
  • Dr. Amancio Carnero (IBIS, Sevilla)


All time people CurrentFormer

Name keywords/Current situation

Ana M. Rojas (since 2009)

Computational Biologist

Ana

Principal Investigator

#Evolution #Structural#Bioinformatics #Transcription, #Integration

Patricia Medina (since 2016 as Master)

Biologist

Patricia Medina

PhD student

#Regeneration #Regulation #Transcription

María de Maeztu Fellow, PhD student

Thesis: Regeneration networks. Co-supervised with Fernando Casares

Israel Barrios (since Sept 2019)

Engineer

Israel Barrios

Technician

#MachineLearning #Structure/Function #Integration

Protein evolution, prediction, function.

Antonio Parra (2019-2020)

Biologist

Antonio

Master student

#MachineLearning #Transcription #Integration

M. Victoria Mencucci (2019-2020)

Biologist

M.Victoria

Posdoctoral visiting

#Transcription #Diabetes #Integration

Centro de EndocrinologĂ­a Experimental y Aplicada (CENEXA), Facultad de Ciencias MĂ©dicas, UNLP, Argentina.

Ildefonso (Alonso) Cases (2009-2014 at IMPPC)

Alonso

Research Associate

Now: Head of the CABD Bioinformatics platform (since 2019) .

previous:CEO of REDGene Bioinformatics .

#Statistics #Regulation #Transcription #Visualisation #Integration #Bioinformatics

Juan Antonio Cordero (2016-2018 at IBiS)

Juan A

Technician

Head of the Bioinformatics Unit at IBiS, Sevilla.

#Programing #RNAseq #Statistics #Bioinformatics

Eduardo Andrés (2014-2016 at IBIS)

Edu

PhD student

Thesis: Transcriptional networks.

NOW: Head of the Bioinformatics Unit at IBPLN, Granada.

#Programming #Transcriptomics #Visualisation #Integration #Bioinformatics

Rocío Nuñez, PhD (2014-2016 at IBiS)

Rocio

Master student.

(Transcriptomics)

At the Human Genotyping Unit, CNIO, Madrid .

#Transcriptomics #Bioinformatics

Aida Arcas(2010-2013 at IMPPC)

Aida

PhD student

Thesis: Evolution of DDR networks

At Maite Huarte's lab at CIMA, in Pamplona.

#Evolution #Bioinformatics #BiologicalSequences

Eduard Porta (2011-2013 at IMPPC)

Eduard

PhD student

Thesis: Disease Networks

Co-direction: Alonso Cases.

Currently Senior Scientist at Alfonso Valencia's lab, BSC, Barcelona , and Group Leader of the Cancer Immunogenics group at Josep Carreras Leukaemia Research Institute,

#Networks #Bioinformatics

Ida Paramonov (2011-2013 at IMPPC)

Ida

Programmer & Data analyst

Currently as a Bioinformatics Analyst at Genetics medicine group, VHIR, Barcelona.

#Data Analyses #Transcription #Visualisation #Integration #Statistics #Bioinformatics

Joel López (2012 at IMPPC)

Joel

Master student.

Currently CTO in BTC assessors .

#Bioinformatics